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STRINGSTRING
CMTM8 protein (Latimeria chalumnae) - STRING interaction network
"CMTM8" - CKLF-like MARVEL transmembrane domain containing 8 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMTM8CKLF-like MARVEL transmembrane domain containing 8 (126 aa)    
Predicted Functional Partners:
CMTM7
CKLF-like MARVEL transmembrane domain containing 7 (164 aa)
 
       
  0.903
CMTM6
CKLF-like MARVEL transmembrane domain containing 6 (186 aa)
           
  0.829
CMTM3
CKLF-like MARVEL transmembrane domain containing 3 (115 aa)
           
  0.763
CCDC155
Uncharacterized protein; Coiled-coil domain containing 155 (796 aa)
           
  0.762
FRMD1
FERM domain containing 1 (553 aa)
           
  0.762
EMILIN2
Elastin microfibril interfacer 2 (1045 aa)
           
  0.629
CDR2L
Cerebellar degeneration-related protein 2-like (463 aa)
           
  0.628
CMTM4
CKLF-like MARVEL transmembrane domain containing 4 (150 aa)
     
   
  0.590
PTPRN2
Protein tyrosine phosphatase, receptor type, N polypeptide 2 (207 aa)
       
 
  0.570
SDHAF3
Succinate dehydrogenase complex assembly factor 3; ACN9 homolog (S. cerevisiae) (127 aa)
           
  0.548
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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