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STRINGSTRING
DCP2 protein (Latimeria chalumnae) - STRING interaction network
DCP2 decapping enzyme homolog (S. cerevisiae) in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCP2DCP2 decapping enzyme homolog (S. cerevisiae) (402 aa)    
Predicted Functional Partners:
EDC3
Enhancer of mRNA decapping 3 homolog (S. cerevisiae) (513 aa)
   
 
  0.985
EDC4
Enhancer of mRNA decapping 4 (1406 aa)
     
 
  0.972
DCP1A
Decapping mRNA 1A; DCP1 decapping enzyme homolog A (S. cerevisiae) (597 aa)
     
 
  0.967
PATL1
PAT1 homolog 1, processing body mRNA decay factor; Protein associated with topoisomerase II homolog 1 (yeast) (723 aa)
     
 
  0.952
DCP1B
Decapping mRNA 1B (600 aa)
     
 
  0.946
LSM14A
LSM14A, mRNA processing body assembly factor; LSM14 homolog Aa (SCD6, S. cerevisiae) (483 aa)
     
 
  0.939
XRN1
5’-3’ exoribonuclease 1 (1737 aa)
     
 
  0.935
UPF1
Uncharacterized protein; UPF1 regulator of nonsense transcripts homolog (yeast) (697 aa)
     
 
  0.909
LSM14B
LSM14B, SCD6 homolog B (S. cerevisiae) (433 aa)
     
 
  0.904
PATL2
Si-ch211-103b1.2; Protein associated with topoisomerase II homolog 2 (yeast) (758 aa)
     
 
  0.902
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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