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STRINGSTRING
RAB38 protein (Latimeria chalumnae) - STRING interaction network
"RAB38" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB38Uncharacterized protein; RAB38, member RAS oncogene family (112 aa)    
Predicted Functional Partners:
ANKRD27
Ankyrin repeat domain 27 (VPS9 domain) (888 aa)
       
 
  0.719
RAB23
RAB23, member RAS oncogene family (237 aa)
     
   
  0.714
NCAPG
non-SMC condensin I complex, subunit G (1067 aa)
     
   
  0.636
TYRP1
Tyrosinase-related protein 1 (536 aa)
     
   
  0.554
ARFIP1
ADP-ribosylation factor interacting protein 1 (252 aa)
           
  0.499
TYR
Tyrosinase (532 aa)
     
   
  0.498
HPS4
HPS4, biogenesis of lysosomal organelles complex 3 subunit 2; Hermansky-Pudlak syndrome 4 (720 aa)
     
   
  0.470
GRM5
Uncharacterized protein; Glutamate receptor, metabotropic 5 (712 aa)
           
  0.460
SLC5A7
Solute carrier family 5 (sodium/choline cotransporter), member 7; Belongs to the sodium-solute symporter (SSF) (TC 2.A.21) family (579 aa)
           
  0.456
DCT
Dopachrome tautomerase (521 aa)
     
   
  0.450
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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