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STRINGSTRING
ENSLACG00000000607 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000607" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000607Uncharacterized protein (288 aa)    
Predicted Functional Partners:
CDC5L
Cell division cycle 5-like (803 aa)
     
      0.903
ENSLACG00000001792
Uncharacterized protein; mutS homolog 2 (E. coli) (360 aa)
     
 
  0.874
MSH2
Uncharacterized protein; mutS homolog 2 (447 aa)
     
 
  0.874
TOPBP1
Topoisomerase (DNA) II binding protein 1 (1542 aa)
     
 
  0.732
EXO1
Exonuclease 1 (805 aa)
     
 
  0.728
DNA2
DNA replication helicase/nuclease 2 (925 aa)
     
 
  0.710
BLM
Bloom syndrome, RecQ helicase-like (1450 aa)
     
 
  0.693
BPTF
Bromodomain PHD finger transcription factor (3013 aa)
     
 
  0.667
TRIM28
Tripartite motif containing 28 (799 aa)
       
 
  0.662
BTAF1
BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (1848 aa)
     
   
  0.658
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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