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STRINGSTRING
SMC2 protein (Latimeria chalumnae) - STRING interaction network
"SMC2" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC2Uncharacterized protein; Structural maintenance of chromosomes 2 (374 aa)    
Predicted Functional Partners:
NCAPG
non-SMC condensin I complex, subunit G (1067 aa)
     
 
  0.987
NCAPH
Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes (728 aa)
     
 
  0.987
NCAPD2
Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (1378 aa)
     
 
  0.987
SMC4
Structural maintenance of chromosomes 4 (1297 aa)
   
 
0.979
NCAPH2
non-SMC condensin II complex, subunit H2 (617 aa)
     
 
  0.952
TOP2A
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1569 aa)
   
 
  0.931
NCAPD3
Uncharacterized protein; non-SMC condensin II complex, subunit D3 (189 aa)
     
 
  0.926
NDC80
NDC80 kinetochore complex component (661 aa)
   
 
  0.924
NCAPG2
non-SMC condensin II complex, subunit G2 (1154 aa)
     
 
  0.904
CDC5L
Cell division cycle 5-like (803 aa)
     
 
  0.902
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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