STRINGSTRING
TBL3 protein (Latimeria chalumnae) - STRING interaction network
"TBL3" - Transducin in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBL3Transducin (beta)-like 3 (803 aa)    
Predicted Functional Partners:
UTP15
UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae) (524 aa)
     
  0.999
PWP2
PWP2 periodic tryptophan protein homolog (yeast) (873 aa)
     
0.998
WDR36
WD repeat domain 36 (865 aa)
     
0.998
WDR3
WD repeat domain 3 (944 aa)
     
0.998
RRP9
Ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast) (495 aa)
   
0.998
DCAF13
DDB1 and CUL4 associated factor 13 (472 aa)
     
  0.997
MPHOSPH10
M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein); Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing (671 aa)
     
  0.996
UTP18
UTP18 small subunit (SSU) processome component homolog (yeast) (535 aa)
     
  0.996
UTP6
UTP6, small subunit (SSU) processome component, homolog (yeast) (597 aa)
     
  0.996
CIRH1A
Cirrhosis, autosomal recessive 1A (cirhin) (697 aa)
     
  0.995
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
Server load: low (7%) [HD]