STRINGSTRING
KRIT1 protein (Latimeria chalumnae) - STRING interaction network
KRIT1, ankyrin repeat containing in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRIT1KRIT1, ankyrin repeat containing (733 aa)    
Predicted Functional Partners:
CCM2
Cerebral cavernous malformation 2 (447 aa)
       
 
  0.978
ITGB1BP1
Integrin beta 1 binding protein 1 (200 aa)
       
 
  0.919
RAP1A
RAP1A, member of RAS oncogene family (185 aa)
     
 
  0.870
RAP1B
RAP1B, member of RAS oncogene family (184 aa)
     
 
  0.870
PDCD10
Programmed cell death 10 (210 aa)
     
 
  0.706
CCM2L
Cerebral cavernous malformation 2-like (594 aa)
           
  0.565
KCNF1
Potassium voltage-gated channel, subfamily F, member 1 (491 aa)
     
   
  0.553
HEG1
HEG homolog 1 (zebrafish) (800 aa)
       
 
  0.518
STK26
Serine/threonine protein kinase 26 (415 aa)
     
   
  0.482
RAP2A
RAP2A, member of RAS oncogene family (183 aa)
     
 
  0.475
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
Server load: low (8%) [HD]