STRINGSTRING
TNRC6B protein (Latimeria chalumnae) - STRING interaction network
"TNRC6B" - Trinucleotide repeat containing 6B in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNRC6BTrinucleotide repeat containing 6B (1796 aa)    
Predicted Functional Partners:
MOV10
Mov10, Moloney leukemia virus 10, homolog (mouse) (1031 aa)
     
 
  0.676
EIF2C1
Eukaryotic translation initiation factor 2C, 1 (852 aa)
     
  0.604
EIF2C4
Eukaryotic translation initiation factor 2C, 4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs (861 aa)
     
  0.604
EIF2C2
Eukaryotic translation initiation factor 2C, 2 (861 aa)
     
  0.604
CPA5
Carboxypeptidase A5 (779 aa)
     
      0.604
GLRA1
Glycine receptor, alpha 1 (389 aa)
       
      0.569
GLRA2
Glycine receptor, alpha 2 (459 aa)
       
      0.569
GLRA3
Glycine receptor, alpha 3 (467 aa)
       
      0.569
MOV10L1
Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse) (1107 aa)
     
 
  0.496
HELZ2
Helicase with zinc finger 2, transcriptional coactivator (2883 aa)
     
 
  0.471
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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