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SGSM3 protein (Latimeria chalumnae) - STRING interaction network
"SGSM3" - Small G protein signaling modulator 3 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGSM3Small G protein signaling modulator 3 (356 aa)    
Predicted Functional Partners:
COG4
Component of oligomeric golgi complex 4 (784 aa)
     
      0.928
POLR2G
Polymerase (RNA) II (DNA directed) polypeptide G (172 aa)
 
 
        0.643
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1 (629 aa)
     
      0.600
LRRK2
Leucine-rich repeat kinase 2 (2508 aa)
     
  0.593
ENSLACG00000005609
Uncharacterized protein (489 aa)
     
  0.537
RAP2A
RAP2A, member of RAS oncogene family (183 aa)
       
  0.522
RAP2B
RAP2B, member of RAS oncogene family (183 aa)
       
  0.522
RAP2C
RAP2C, member of RAS oncogene family (183 aa)
       
  0.522
ENSLACG00000016857
Uncharacterized protein (228 aa)
       
  0.495
RAB11A
RAB11A, member RAS oncogene family (215 aa)
       
  0.495
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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