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SGSM3 protein (Latimeria chalumnae) - STRING interaction network
"SGSM3" - Small G protein signaling modulator 3 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGSM3Small G protein signaling modulator 3 (356 aa)    
Predicted Functional Partners:
COG4
Component of oligomeric golgi complex 4 (784 aa)
     
      0.848
DENND5A
DENN/MADD domain containing 5A (1257 aa)
     
   
  0.823
ZMYM4
Uncharacterized protein; Si-ch211-173p18.3 (1555 aa)
           
  0.821
OTUD3
OTU domain containing 3 (395 aa)
           
  0.820
DEDD
Death effector domain containing (354 aa)
           
  0.815
POFUT1
Protein O-fucosyltransferase 1 (329 aa)
           
  0.815
UFSP2
UFM1-specific peptidase 2 (473 aa)
           
  0.815
NUBPL
Nucleotide binding protein-like (331 aa)
           
  0.780
SBF1
SET binding factor 1; Belongs to the protein-tyrosine phosphatase family. Non-receptor class myotubularin subfamily (1822 aa)
     
   
  0.754
HHIPL2
HHIP-like 2 (787 aa)
           
  0.754
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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