STRINGSTRING
GAS1 protein (Latimeria chalumnae) - STRING interaction network
"GAS1" - Growth arrest-specific 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAS1Growth arrest-specific 1 (259 aa)    
Predicted Functional Partners:
DHH
Desert hedgehog; Intercellular signal essential for a variety of patterning events during development (424 aa)
       
  0.904
SHH
Sonic hedgehog; Intercellular signal essential for a variety of patterning events during development (421 aa)
       
  0.904
IHH
Indian hedgehog; Intercellular signal essential for a variety of patterning events during development (410 aa)
       
  0.904
PTCH2
Patched 2 (1134 aa)
         
  0.900
PTCH1
Patched 1 (1287 aa)
         
  0.900
CDON
Cdon homolog (mouse) (1293 aa)
     
 
  0.856
BOC
Boc homolog (mouse) (1011 aa)
     
 
  0.856
LRP2
Low density lipoprotein receptor-related protein 2 (4649 aa)
         
  0.807
ENSLACG00000005095
Uncharacterized protein (236 aa)
         
 
0.800
GAS2
Growth arrest-specific 2 (322 aa)
     
   
  0.704
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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