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DDX21 protein (Latimeria chalumnae) - STRING interaction network
"DDX21" - DEAD in Latimeria chalumnae
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX21DEAD (Asp-Glu-Ala-Asp) box helicase 21 (582 aa)    
Predicted Functional Partners:
DHX8
DEAH (Asp-Glu-Ala-His) box polypeptide 8 (1211 aa)
   
  0.983
PES1
Pescadillo ribosomal biogenesis factor 1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome (584 aa)
     
 
  0.962
FTSJ3
FtsJ homolog 3 (E. coli) (710 aa)
     
 
  0.926
PPIE
Peptidylprolyl isomerase E (cyclophilin E); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (302 aa)
   
  0.915
GTPBP4
GTP binding protein 4; Involved in the biogenesis of the 60S ribosomal subunit (634 aa)
     
 
  0.892
RPF2
Ribosome production factor 2 homolog (S. cerevisiae) (309 aa)
     
 
  0.879
DDX54
DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 (891 aa)
   
 
0.875
POLR1B
Polymerase (RNA) I polypeptide B, 128kDa; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1135 aa)
     
  0.874
DDX56
DEAD (Asp-Glu-Ala-Asp) box helicase 56 (565 aa)
   
 
0.874
YTHDC2
YTH domain containing 2 (1429 aa)
     
  0.874
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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