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STRINGSTRING
ENSLACG00000000676 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000676" - annotation not available in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000676annotation not available (748 aa)    
Predicted Functional Partners:
EPRS
Glutamyl-prolyl-tRNA synthetase (1965 aa)
   
 
  0.639
MRPL27
Mitochondrial ribosomal protein L27 (150 aa)
   
   
  0.635
SEC61A2
Sec61 alpha 2 subunit (S. cerevisiae) (505 aa)
   
 
  0.613
SEC61A1
annotation not available (471 aa)
   
 
  0.613
YARS
Tyrosine--tRNA ligase; tyrosyl-tRNA synthetase (528 aa)
   
 
  0.575
EFTUD1
Elongation factor Tu GTP binding domain containing 1 (1136 aa)
     
   
  0.545
AASDH
Aminoadipate-semialdehyde dehydrogenase (1122 aa)
         
  0.510
NDUFAB1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (157 aa)
     
 
  0.492
TSFM
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (330 aa)
   
   
  0.457
ALPL
Alkaline phosphatase, liver/bone/kidney (293 aa)
       
 
  0.452
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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