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STRINGSTRING
FEM1B protein (Latimeria chalumnae) - STRING interaction network
"FEM1B" - Fem-1 homolog b (C. elegans) in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FEM1BFem-1 homolog b (C. elegans) (667 aa)    
Predicted Functional Partners:
SPATA17
Spermatogenesis associated 17 (362 aa)
           
  0.774
PPM1F
Protein phosphatase, Mg2+/Mn2+ dependent, 1F (444 aa)
     
 
  0.765
ANKRD37
Ankyrin repeat domain 37 (173 aa)
       
 
  0.750
CTGF
Connective tissue growth factor (344 aa)
       
 
  0.707
CUL2
Cullin 2; Belongs to the cullin family (745 aa)
     
 
  0.698
COPS8
COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis) (217 aa)
       
 
  0.692
COPS6
COP9 signalosome subunit 6 (248 aa)
       
 
  0.687
SLBP
Stem-loop binding protein (293 aa)
       
      0.652
WDTC1
WD and tetratricopeptide repeats 1 (646 aa)
           
  0.630
GLI1
GLI family zinc finger 1; GLI-Kruppel family member GLI3 (1380 aa)
     
 
  0.596
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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