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FEM1B protein (Latimeria chalumnae) - STRING interaction network
"FEM1B" - Fem-1 homolog b (C. elegans) in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FEM1BFem-1 homolog b (C. elegans) (667 aa)    
Predicted Functional Partners:
PPM1F
Protein phosphatase, Mg2+/Mn2+ dependent, 1F (444 aa)
     
  0.772
PPM1E
Protein phosphatase, Mg2+/Mn2+ dependent, 1E (611 aa)
     
  0.772
LRRK2
Leucine-rich repeat kinase 2 (2508 aa)
     
  0.715
PHLPP2
PH domain and leucine rich repeat protein phosphatase 2 (1186 aa)
     
  0.697
COPS2
COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis) (443 aa)
     
  0.677
RAD54B
RAD54 homolog B (S. cerevisiae) (2005 aa)
     
  0.670
ASH1L
Ash1 (absent, small, or homeotic)-like (Drosophila) (925 aa)
     
  0.655
GLI1
GLI family zinc finger 1 (1380 aa)
     
  0.653
GLI2
GLI family zinc finger 2 (1366 aa)
     
  0.653
GLI3
GLI family zinc finger 3 (1456 aa)
     
  0.653
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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