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STRINGSTRING
ENSLACG00000000702 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000702" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000702Uncharacterized protein; Opsin 4xb; Belongs to the G-protein coupled receptor 1 family (260 aa)    
Predicted Functional Partners:
NR6A1
Nuclear receptor subfamily 6, group A, member 1 (444 aa)
           
  0.783
ARNTL
Aryl hydrocarbon receptor nuclear translocator-like (635 aa)
       
 
  0.692
PER2
Period circadian clock 2 (1371 aa)
           
  0.548
ADCYAP1
Adenylate cyclase activating polypeptide 1a (199 aa)
     
 
  0.526
CRY2
Cryptochrome circadian clock 2 (434 aa)
       
 
  0.497
CRY1
Cryptochrome circadian clock 1 (653 aa)
       
 
  0.492
TRPC6
Transient receptor potential cation channel, subfamily C, member 6; Belongs to the transient receptor (TC 1.A.4) family (697 aa)
     
 
  0.491
SON
SON DNA binding protein (489 aa)
           
  0.479
SLITRK6
SLIT and NTRK-like family, member 6 (841 aa)
           
  0.476
PER3
Period circadian clock 3 (1317 aa)
           
  0.451
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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