STRINGSTRING
CDT1 protein (Latimeria chalumnae) - STRING interaction network
"CDT1" - Chromatin licensing and DNA replication factor 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDT1Chromatin licensing and DNA replication factor 1 (520 aa)    
Predicted Functional Partners:
CDC6
Cell division cycle 6 homolog (S. cerevisiae) (525 aa)
     
  0.996
GMNN
Geminin, DNA replication inhibitor (231 aa)
     
  0.989
MCM6
Minichromosome maintenance complex component 6 (826 aa)
     
  0.987
ORC1
Origin recognition complex, subunit 1 (894 aa)
     
  0.981
MCM7
Minichromosome maintenance complex component 7 (614 aa)
     
  0.974
MCM5
Minichromosome maintenance complex component 5 (635 aa)
     
  0.970
MCM4
Minichromosome maintenance complex component 4 (858 aa)
     
  0.969
MCM8
Minichromosome maintenance complex component 8 (852 aa)
     
  0.967
CDC5L
CDC5 cell division cycle 5-like (S. pombe) (803 aa)
     
 
  0.959
MCM2
Minichromosome maintenance complex component 2 (888 aa)
     
  0.958
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
Server load: low (11%) [HD]