STRINGSTRING
FAM105B protein (Latimeria chalumnae) - STRING interaction network
"FAM105B" - Family with sequence similarity 105, member B in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM105BFamily with sequence similarity 105, member B (225 aa)    
Predicted Functional Partners:
ENSLACG00000001490
Uncharacterized protein (1087 aa)
     
  0.954
RNF216
Ring finger protein 216 (932 aa)
     
  0.856
SHARPIN
SHANK-associated RH domain interactor (681 aa)
     
  0.625
RBCK1
RanBP-type and C3HC4-type zinc finger containing 1 (175 aa)
     
  0.625
SPATA2
Spermatogenesis associated 2 (525 aa)
           
  0.560
YOD1
YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae) (304 aa)
           
  0.539
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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