STRINGSTRING
WDR19 protein (Latimeria chalumnae) - STRING interaction network
"WDR19" - WD repeat domain 19 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR19WD repeat domain 19 (895 aa)    
Predicted Functional Partners:
IFT122
Intraflagellar transport 122 homolog (Chlamydomonas) (1118 aa)
     
  0.930
WDR35
WD repeat domain 35 (1181 aa)
     
  0.865
IFT140
Intraflagellar transport 140 homolog (Chlamydomonas) (1471 aa)
     
0.856
IFT80
Intraflagellar transport 80 (780 aa)
     
  0.832
IFT88
Intraflagellar transport 88 homolog (Chlamydomonas) (833 aa)
     
 
  0.817
TTC21A
Tetratricopeptide repeat domain 21A (1299 aa)
     
  0.808
TTC21B
Tetratricopeptide repeat domain 21B (1311 aa)
     
  0.808
IFT46
Intraflagellar transport 46 homolog (Chlamydomonas) (354 aa)
     
 
  0.796
ENSLACG00000013829
Uncharacterized protein (651 aa)
     
 
  0.792
IFT52
Intraflagellar transport 52 homolog (Chlamydomonas) (440 aa)
     
 
  0.783
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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