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SLC35A1 protein (Latimeria chalumnae) - STRING interaction network
"SLC35A1" - Solute carrier family 35 (CMP-sialic acid transporter), member A1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
SLC35A1Solute carrier family 35 (CMP-sialic acid transporter), member A1 (340 aa)    
Predicted Functional Partners:
GNE
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase (742 aa)
         
  0.788
ATP6V1G1
V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (152 aa)
     
 
  0.759
SLC35B2
Solute carrier family 35, member B2 (448 aa)
     
   
  0.755
LPHN1
Uncharacterized protein; Latrophilin 1; Belongs to the G-protein coupled receptor 2 family (639 aa)
           
  0.703
ADGRL1
annotation not available (774 aa)
           
  0.703
SLC35B3
Solute carrier family 35 (adenosine 3’-phospho 5’-phosphosulfate transporter), member B3 (369 aa)
     
   
  0.694
SLC35D1
Solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1 (353 aa)
     
   
  0.666
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1 (1912 aa)
     
   
  0.657
ATP6V0B
Uncharacterized protein; ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b; Belongs to the V-ATPase proteolipid subunit family (125 aa)
     
   
  0.653
RAB29
RAB29, member RAS oncogene family (206 aa)
           
  0.649
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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