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FABP1 protein (Latimeria chalumnae) - STRING interaction network
"FABP1" - Fatty acid binding protein 1, liver in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FABP1Fatty acid binding protein 1, liver (98 aa)    
Predicted Functional Partners:
FABP2
Fatty acid binding protein 2, intestinal (132 aa)
     
 
  0.927
FABP3
Fatty acid binding protein 3, muscle and heart (133 aa)
         
  0.909
FABP7
Fatty acid binding protein 7, brain (132 aa)
         
  0.857
ENSLACG00000007863
Uncharacterized protein (132 aa)
         
  0.821
FABP6
Fatty acid binding protein 6, ileal (127 aa)
         
0.808
PPARD
Peroxisome proliferator-activated receptor delta (396 aa)
     
  0.647
PPARA
Peroxisome proliferator-activated receptor alpha (468 aa)
     
  0.647
HELZ2
Helicase with zinc finger 2, transcriptional coactivator (2883 aa)
         
  0.607
GOT2
Glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2) (392 aa)
     
   
  0.597
SIN3A
SIN3 transcription regulator homolog A (yeast) (1124 aa)
       
    0.589
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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