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STRINGSTRING
RGN protein (Latimeria chalumnae) - STRING interaction network
"RGN" - Regucalcin in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RGNRegucalcin (299 aa)    
Predicted Functional Partners:
IDNK
idnK, gluconokinase homolog (E. coli); Belongs to the gluconokinase GntK/GntV family (181 aa)
   
 
  0.944
SEC16B
Uncharacterized protein; SEC16 homolog B (S. cerevisiae) (270 aa)
     
   
  0.881
FAAH2
Fatty acid amide hydrolase 2a (534 aa)
   
   
  0.784
SEC16A
Protein transport protein sec16; Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus and for normal transitional endoplasmic reticulum (tER) organization (2395 aa)
     
   
  0.765
H6PD
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) (793 aa)
   
   
  0.711
MRVI1
Murine retrovirus integration site 1 homolog (802 aa)
           
  0.643
GPKOW
Uncharacterized protein; G patch domain and KOW motifs (273 aa)
           
  0.629
ENOSF1
Enolase superfamily member 1 (452 aa)
         
  0.599
BSG
Basigin (Ok blood group); Basigin (368 aa)
           
  0.599
EFHD2
EF-hand domain family, member D2 (236 aa)
           
  0.573
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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