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STRINGSTRING
ENSLACG00000000806 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000806" - annotation not available in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000806annotation not available (803 aa)    
Predicted Functional Partners:
SMG6
Uncharacterized protein; SMG6 nonsense mediated mRNA decay factor (465 aa)
 
     
    0.913
UPF1
Uncharacterized protein; UPF1 regulator of nonsense transcripts homolog (yeast) (697 aa)
     
 
  0.874
SMG1
SMG1, nonsense mediated mRNA decay associated PI3K related kinase; PI-3-kinase-related kinase SMG-1 (3451 aa)
     
 
  0.839
UPF2
UPF2, regulator of nonsense mediated mRNA decay; UPF2 regulator of nonsense transcripts homolog (yeast) (1273 aa)
     
 
  0.800
UPF3B
UPF3B, regulator of nonsense mediated mRNA decay; UPF3 regulator of nonsense transcripts homolog B (yeast) (470 aa)
     
 
  0.781
UPF3A
Uncharacterized protein; UPF3 regulator of nonsense transcripts homolog A (yeast) (332 aa)
     
 
  0.781
SMG8
Smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans) (913 aa)
     
   
  0.770
SMG9
SMG9 nonsense mediated mRNA decay factor (519 aa)
     
   
  0.768
TERT
Uncharacterized protein; Telomerase reverse transcriptase (974 aa)
     
 
  0.743
XRN1
5’-3’ exoribonuclease 1 (1737 aa)
     
 
  0.700
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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