STRINGSTRING
NEFH protein (Latimeria chalumnae) - STRING interaction network
"NEFH" - Neurofilament, heavy polypeptide in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEFHNeurofilament, heavy polypeptide (351 aa)    
Predicted Functional Partners:
GRIA1
Glutamate receptor, ionotropic, AMPA 1 (835 aa)
     
 
  0.510
GRIN2B
Glutamate receptor, ionotropic, N-methyl D-aspartate 2B (1450 aa)
     
  0.468
GRIN2A
Glutamate receptor, ionotropic, N-methyl D-aspartate 2A (1088 aa)
     
  0.468
GRIN2D
Glutamate receptor, ionotropic, N-methyl D-aspartate 2D (1276 aa)
     
  0.455
GRIN2C
Glutamate receptor, ionotropic, N-methyl D-aspartate 2C (1375 aa)
     
  0.455
CAMK2A
Calcium/calmodulin-dependent protein kinase II alpha (620 aa)
     
 
  0.423
CAMK2B
Calcium/calmodulin-dependent protein kinase II beta (673 aa)
     
 
  0.423
CAMK2G
Calcium/calmodulin-dependent protein kinase II gamma (577 aa)
     
 
  0.423
RASGRF2
Ras protein-specific guanine nucleotide-releasing factor 2 (1168 aa)
     
 
    0.419
RASGRF1
Ras protein-specific guanine nucleotide-releasing factor 1 (1240 aa)
     
 
    0.419
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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