STRINGSTRING
CCDC138 protein (Latimeria chalumnae) - STRING interaction network
"CCDC138" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC138Uncharacterized protein; Coiled-coil domain containing 138 (259 aa)    
Predicted Functional Partners:
PIBF1
Progesterone immunomodulatory binding factor 1 (644 aa)
       
 
  0.784
WDR90
WD repeat domain 90 (1846 aa)
           
  0.783
CCDC61
Coiled-coil domain containing 61 (528 aa)
           
  0.782
SSX2IP
annotation not available (495 aa)
       
 
  0.781
ANKRD55
Ankyrin repeat domain 55 (661 aa)
           
  0.781
KIAA1328
KIAA1328 (601 aa)
           
  0.781
TTLL5
Tubulin tyrosine ligase-like family, member 5 (1047 aa)
           
  0.779
TBC1D31
TBC1 domain family, member 31 (1092 aa)
     
   
  0.652
RBM27
RNA binding motif protein 27 (1042 aa)
           
  0.630
PIEZO1
Piezo-type mechanosensitive ion channel component 1 (2125 aa)
           
  0.548
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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