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STRINGSTRING
ENSLACG00000000849 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000849" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000849Uncharacterized protein; WD repeat domain 19 (417 aa)    
Predicted Functional Partners:
IFT122
Intraflagellar transport 122 (1118 aa)
     
 
  0.888
IFT140
Intraflagellar transport 140 homolog (Chlamydomonas) (1471 aa)
     
 
  0.848
IFT43
Uncharacterized protein; Intraflagellar transport 43 (124 aa)
     
 
  0.785
IFT80
Intraflagellar transport 80 (780 aa)
     
 
  0.780
WDR35
WD repeat domain 35 (1181 aa)
     
 
  0.780
BBS1
Bardet-Biedl syndrome 1 (596 aa)
     
 
  0.746
IFT88
Intraflagellar transport 88 (833 aa)
     
   
  0.710
WDR19
Uncharacterized protein; WD repeat domain 19 (895 aa)
 
            0.705
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function (715 aa)
     
 
  0.697
DYNC2LI1
Dynein, cytoplasmic 2, light intermediate chain 1 (362 aa)
     
   
  0.681
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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