STRINGSTRING
GABARAPL1 protein (Latimeria chalumnae) - STRING interaction network
"GABARAPL1" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GABARAPL1Uncharacterized protein (87 aa)    
Predicted Functional Partners:
ATG7
Autophagy related 7 (593 aa)
     
  0.994
ATG3
Autophagy related 3 (314 aa)
     
  0.964
ATG4A
Autophagy related 4A, cysteine peptidase (385 aa)
     
  0.941
ATG4B
Autophagy related 4B, cysteine peptidase (396 aa)
     
  0.941
NBR1
Neighbor of BRCA1 gene 1 (1005 aa)
     
  0.920
ATG5
Autophagy related 5; Involved in autophagic vesicle formation (275 aa)
     
  0.907
GABARAPL2
GABA(A) receptor-associated protein-like 2 (117 aa)
     
 
0.894
ATG4D
Autophagy related 4D, cysteine peptidase (498 aa)
     
  0.879
ATG4C
Autophagy related 4C, cysteine peptidase (456 aa)
     
  0.879
ATG12
Autophagy related 12; Ubiquitin-like protein involved in autophagic vesicle formation (145 aa)
     
  0.867
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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