STRINGSTRING
PDZD7 protein (Latimeria chalumnae) - STRING interaction network
"PDZD7" - PDZ domain containing 7 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZD7PDZ domain containing 7 (505 aa)    
Predicted Functional Partners:
GPR98
G protein-coupled receptor 98 (5847 aa)
           
  0.487
ENSLACG00000008387
Uncharacterized protein (1963 aa)
           
  0.449
ENSLACG00000004195
Uncharacterized protein (2029 aa)
           
  0.449
TECTA
Tectorin alpha (2122 aa)
           
  0.449
STOX2
Storkhead box 2 (935 aa)
           
  0.424
DFNB59
Deafness, autosomal recessive 59 (355 aa)
     
   
  0.416
USH2A
Usher syndrome 2A (autosomal recessive, mild) (1471 aa)
           
  0.406
ENSLACG00000004139
Uncharacterized protein (2030 aa)
           
  0.406
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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