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STRINGSTRING
ENSLACG00000000877 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000000877" - Lefty2 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000000877Lefty2; Lefty1 (364 aa)    
Predicted Functional Partners:
ENSLACG00000008347
Southpaw (414 aa)
     
 
  0.928
NODAL
Uncharacterized protein; Nodal-related 2 (409 aa)
     
 
  0.900
PITX2
Homeobox protein; Paired-like homeodomain transcription factor 2 (314 aa)
     
   
  0.878
TDGF1
Teratocarcinoma-derived growth factor 1; One-eyed pinhead (154 aa)
     
 
  0.845
TGFB3
Transforming growth factor, beta 3 (409 aa)
         
  0.807
TGFB2
Transforming growth factor, beta 2 (415 aa)
         
0.801
TGFB1
Transforming growth factor, beta 1 (401 aa)
         
0.800
ENSLACG00000017213
Transforming growth factor, beta 2, like (414 aa)
         
 
0.800
ACVR2B
Serine/threonine-protein kinase receptor; Activin A receptor, type IIB (515 aa)
       
 
  0.724
ACVR1B
Receptor protein serine/threonine kinase; Activin A receptor, type IB (489 aa)
       
 
  0.697
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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