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SMARCD3 protein (Latimeria chalumnae) - STRING interaction network
"SMARCD3" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMARCD3Uncharacterized protein; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 (255 aa)    
Predicted Functional Partners:
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (384 aa)
     
 
  0.932
PBRM1
Polybromo 1 (1496 aa)
     
 
  0.893
BPTF
Bromodomain PHD finger transcription factor (3013 aa)
     
 
  0.879
SMARCA4
Uncharacterized protein; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (822 aa)
     
 
  0.865
SMARCE1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 (414 aa)
     
 
  0.861
ARID1B
AT rich interactive domain 1B (SWI1-like) (1533 aa)
     
 
  0.847
SMARCC2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 (1212 aa)
     
 
  0.823
ARID1A
Uncharacterized protein; AT rich interactive domain 1A (SWI-like) (1861 aa)
     
 
  0.822
CDC5L
Cell division cycle 5-like (803 aa)
     
      0.818
PHF10
PHD finger protein 10 (518 aa)
     
 
  0.802
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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