STRINGSTRING
ENSLACG00000001049 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000001049" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000001049Uncharacterized protein (454 aa)    
Predicted Functional Partners:
MIB1
Mindbomb E3 ubiquitin protein ligase 1 (989 aa)
     
 
    0.587
UNK
Unkempt homolog (Drosophila) (820 aa)
     
 
    0.569
UNKL
Unkempt homolog (Drosophila)-like (720 aa)
     
 
    0.569
UBA52
Uncharacterized protein (128 aa)
       
    0.542
TRAF7
TNF receptor-associated factor 7, E3 ubiquitin protein ligase (671 aa)
         
  0.522
KDM2B
Lysine (K)-specific demethylase 2B (1261 aa)
     
 
    0.427
KDM2A
Lysine (K)-specific demethylase 2A (910 aa)
     
 
    0.427
FBXL19
Uncharacterized protein (742 aa)
     
 
    0.427
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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