STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP13A4Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1215 aa)    
Predicted Functional Partners:
GAK
J domain-containing protein.
   
 
 0.743
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
   
  
 0.595
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
   
 
 0.507
CLMN
Calmin.
   
  
 0.433
ATP1B4
Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.
    
 0.429
COASY
Coenzyme A synthase.
     
 0.426
ITGB1BP1
Integrin subunit beta 1 binding protein 1.
      
 0.426
TMEM30A
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 0.406
TMEM30B
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 0.406
LOC102359099
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
    
 0.406
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (28%) [HD]