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ATP13A4 protein (Latimeria chalumnae) - STRING interaction network
"ATP13A4" - Cation-transporting ATPase in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP13A4Cation-transporting ATPase (1215 aa)    
Predicted Functional Partners:
PRRT3
Proline-rich transmembrane protein 3 (643 aa)
     
        0.657
ITGB1BP1
Integrin beta 1 binding protein 1 (200 aa)
           
  0.637
CDH19
Cadherin 19; Cadherins are calcium-dependent cell adhesion proteins (794 aa)
     
 
  0.564
SLC38A4
Solute carrier family 38, member 4 (547 aa)
       
 
  0.563
NARS2
asparaginyl-tRNA synthetase 2, mitochondrial (putative) (361 aa)
   
   
  0.554
PM20D1
Peptidase M20 domain containing 1 (517 aa)
           
  0.551
ZW10
Zw10 kinetochore protein (708 aa)
           
  0.514
UBE2G2
Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family (168 aa)
     
   
  0.492
ATP5J
ATP synthase-coupling factor 6, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain (110 aa)
       
 
  0.488
AGPAT2
1-acylglycerol-3-phosphate O-acyltransferase 2; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family (211 aa)
     
 
  0.480
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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