STRINGSTRING
CHCHD1 protein (Latimeria chalumnae) - STRING interaction network
"CHCHD1" - Coiled-coil-helix-coiled-coil-helix domain containing 1 in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHCHD1Coiled-coil-helix-coiled-coil-helix domain containing 1 (122 aa)    
Predicted Functional Partners:
MRPS33
Mitochondrial ribosomal protein S33 (106 aa)
     
      0.954
MRPL14
Mitochondrial ribosomal protein L14 (145 aa)
     
      0.945
MRPS18C
Mitochondrial ribosomal protein S18C; Belongs to the bacterial ribosomal protein bS18 family (128 aa)
     
      0.944
AURKAIP1
Aurora kinase A interacting protein 1 (209 aa)
     
 
  0.927
MRPS18B
Mitochondrial ribosomal protein S18B (242 aa)
     
 
  0.927
PTCD3
Pentatricopeptide repeat domain 3 (605 aa)
     
 
  0.926
MRPL47
Mitochondrial ribosomal protein L47 (257 aa)
     
 
  0.921
MRPS24
Mitochondrial ribosomal protein S24 (132 aa)
     
 
  0.910
MRPL27
Mitochondrial ribosomal protein L27 (150 aa)
     
      0.908
MRPL36
Mitochondrial ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family (115 aa)
     
      0.906
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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