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STRINGSTRING
AGA protein (Latimeria chalumnae) - STRING interaction network
"AGA" - Aspartylglucosaminidase in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGAAspartylglucosaminidase (310 aa)    
Predicted Functional Partners:
GAA
Glucosidase, alpha; acid; Belongs to the glycosyl hydrolase 31 family (888 aa)
           
  0.918
MDM4
MDM4, p53 regulator; Transformed 3T3 cell double minute 4 homolog (mouse) (491 aa)
       
 
  0.859
DOCK11
Dedicator of cytokinesis 11; Belongs to the DOCK family (2076 aa)
     
   
  0.854
UGT8
UDP glycosyltransferase 8; Belongs to the UDP-glycosyltransferase family (537 aa)
           
  0.825
ENSLACG00000012519
Zgc-153169 (319 aa)
   
   
 
0.820
PTPRJ
Protein tyrosine phosphatase, receptor type, J (358 aa)
           
  0.812
DSE
Dermatan sulfate epimerase (959 aa)
     
   
  0.810
PCYT1A
Phosphate cytidylyltransferase 1, choline, alpha b (367 aa)
     
   
  0.787
GUCY2C
Guanylate cyclase 2C (heat stable enterotoxin receptor) (685 aa)
           
  0.786
GCA
Grancalcin, EF-hand calcium binding protein (166 aa)
     
   
  0.784
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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