STRINGSTRING
AGA protein (Latimeria chalumnae) - STRING interaction network
"AGA" - Aspartylglucosaminidase in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGAAspartylglucosaminidase (310 aa)    
Predicted Functional Partners:
ENSLACG00000012519
Uncharacterized protein (319 aa)
   
   
 
0.822
QPCT
Glutaminyl-peptide cyclotransferase (389 aa)
           
  0.727
GAA
Glucosidase, alpha; acid (888 aa)
     
   
  0.717
GGCT
Gamma-glutamylcyclotransferase (178 aa)
           
  0.647
ENSLACG00000011053
Uncharacterized protein (856 aa)
     
   
  0.644
UGT8
UDP glycosyltransferase 8 (537 aa)
           
  0.612
ENSLACG00000014822
Uncharacterized protein (576 aa)
           
  0.584
ACAN
Aggrecan (1860 aa)
           
  0.569
GUCY2C
Guanylate cyclase 2C (heat stable enterotoxin receptor) (685 aa)
           
  0.567
GGT7
Gamma-glutamyltransferase 7 (660 aa)
           
  0.563
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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