STRINGSTRING
ENSLACG00000001921 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000001921" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000001921Uncharacterized protein (165 aa)    
Predicted Functional Partners:
SPCS1
Signal peptidase complex subunit 1 homolog (S. cerevisiae) (100 aa)
     
  0.917
SPCS3
Signal peptidase complex subunit 3 homolog (S. cerevisiae) (180 aa)
     
 
  0.782
SEC11A
SEC11 homolog A (S. cerevisiae) (179 aa)
     
  0.686
SEC11C
SEC11 homolog C (S. cerevisiae) (177 aa)
     
  0.686
MAGT1
Magnesium transporter 1 (336 aa)
     
        0.622
TUSC3
Tumor suppressor candidate 3 (336 aa)
     
        0.622
SSR3
Signal sequence receptor, gamma (translocon-associated protein gamma) (188 aa)
     
 
    0.565
DDOST
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (447 aa)
     
 
    0.531
ARPC5L
Actin related protein 2/3 complex, subunit 5-like; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks (150 aa)
     
   
  0.513
PGRMC1
Progesterone receptor membrane component 1 (179 aa)
       
 
  0.504
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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