STRINGSTRING
DNAAF1 protein (Latimeria chalumnae) - STRING interaction network
"DNAAF1" - Dynein, axonemal, assembly factor 1 in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAAF1Dynein, axonemal, assembly factor 1 (263 aa)    
Predicted Functional Partners:
LRRC6
Leucine rich repeat containing 6 (128 aa)
   
   
  0.684
DNALI1
Dynein, axonemal, light intermediate chain 1 (255 aa)
     
   
  0.611
CCDC40
Coiled-coil domain containing 40 (859 aa)
     
   
  0.593
RSPH9
Radial spoke head 9 homolog (Chlamydomonas) (277 aa)
     
   
  0.582
ENSLACG00000003722
Uncharacterized protein (225 aa)
     
   
  0.576
DNAI2
Dynein, axonemal, intermediate chain 2 (565 aa)
     
   
  0.575
DNAL1
Dynein, axonemal, light chain 1 (192 aa)
   
   
  0.559
PACRG
PARK2 co-regulated (121 aa)
     
   
  0.553
CCDC63
Coiled-coil domain containing 63 (561 aa)
     
   
  0.535
ENSLACG00000001542
Uncharacterized protein (570 aa)
     
   
  0.535
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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