STRINGSTRING
TSR1 protein (Latimeria chalumnae) - STRING interaction network
TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) in Latimeria chalumnae
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSR1TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) (820 aa)    
Predicted Functional Partners:
NOB1
NIN1/RPN12 binding protein 1 homolog (S. cerevisiae) (456 aa)
     
  0.996
RRP12
Ribosomal RNA processing 12 homolog (S. cerevisiae) (1121 aa)
     
 
  0.992
LTV1
LTV1 homolog (S. cerevisiae) (480 aa)
     
  0.989
RIOK2
RIO kinase 2 (yeast) (542 aa)
     
  0.986
UTP15
UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae) (524 aa)
     
    0.986
PNO1
Partner of NOB1 homolog (S. cerevisiae) (250 aa)
     
  0.982
PWP2
PWP2 periodic tryptophan protein homolog (yeast) (873 aa)
     
 
  0.978
CIRH1A
Cirrhosis, autosomal recessive 1A (cirhin) (697 aa)
     
 
  0.977
GNL3L
Guanine nucleotide binding protein-like 3 (nucleolar)-like (331 aa)
     
 
  0.977
GNL3
Guanine nucleotide binding protein-like 3 (nucleolar) (564 aa)
     
 
  0.977
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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