STRINGSTRING
NEUROD6 protein (Latimeria chalumnae) - STRING interaction network
"NEUROD6" - Neuronal differentiation 6 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEUROD6Neuronal differentiation 6 (341 aa)    
Predicted Functional Partners:
CTDSPL
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like (283 aa)
           
  0.548
ADCYAP1R1
Adenylate cyclase activating polypeptide 1 (pituitary) receptor type I (337 aa)
     
   
  0.442
GHRHR
Growth hormone releasing hormone receptor (399 aa)
     
   
  0.431
CRHR2
Corticotropin releasing hormone receptor 2 (270 aa)
     
   
  0.424
PDE1C
Phosphodiesterase 1C, calmodulin-dependent 70kDa (440 aa)
           
  0.422
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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