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STRINGSTRING
ENSLACG00000002253 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000002253" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000002253Uncharacterized protein; Zgc-136493 (197 aa)    
Predicted Functional Partners:
AGXT
Alanine-glyoxylate aminotransferase b (426 aa)
   
   
  0.582
H6PD
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) (793 aa)
   
 
  0.569
GLYCTK
Glycerate kinase (413 aa)
 
   
  0.558
HOGA1
4-hydroxy-2-oxoglutarate aldolase 1; Belongs to the DapA family (338 aa)
   
   
  0.521
CAT
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (521 aa)
   
   
  0.471
GBE1
Glucan (1,4-alpha-), branching enzyme 1 (686 aa)
   
   
  0.459
AGL
Amylo-1, 6-glucosidase, 4-alpha-glucanotransferase a (1533 aa)
     
      0.424
ENSLACG00000009391
annotation not available (226 aa)
   
      0.422
CARKD
annotation not available (183 aa)
   
      0.422
PRDX6
Peroxiredoxin 6 (224 aa)
   
 
  0.420
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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