STRINGSTRING
TMEM125 protein (Latimeria chalumnae) - STRING interaction network
"TMEM125" - Transmembrane protein 125 in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM125Transmembrane protein 125 (220 aa)    
Predicted Functional Partners:
ATG4C
Autophagy related 4C, cysteine peptidase (456 aa)
     
   
  0.749
KANK4
KN motif and ankyrin repeat domains 4 (994 aa)
           
  0.734
TMEM53
Transmembrane protein 53 (282 aa)
           
  0.731
CACHD1
Cache domain containing 1 (1137 aa)
           
  0.719
EFCAB7
EF-hand calcium binding domain 7 (631 aa)
           
  0.717
ALG6
Asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae) (291 aa)
           
  0.692
DNAJC6
DnaJ (Hsp40) homolog, subfamily C, member 6 (993 aa)
           
  0.674
AK4
Adenylate kinase 4; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Efficiently phosphorylates AMP and dAMP using ATP as phosphate donor, but phosphorylates only AMP when using GTP as phosphate donor. Also displays broad nucleoside diphosphate kinase activity (229 aa)
           
  0.646
LRRC4
Leucine rich repeat containing 4 (643 aa)
           
  0.607
RBM28
RNA binding motif protein 28 (559 aa)
           
  0.607
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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