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STRINGSTRING
TMEM125 protein (Latimeria chalumnae) - STRING interaction network
"TMEM125" - Transmembrane protein 125 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM125Transmembrane protein 125 (220 aa)    
Predicted Functional Partners:
CACHD1
Cache domain containing 1 (1137 aa)
           
  0.923
ENSLACG00000001593
Si-dkey-5i3.5 (287 aa)
           
  0.903
KANK4
KN motif and ankyrin repeat domains 4 (994 aa)
           
  0.845
EFCAB7
EF-hand calcium binding domain 7 (631 aa)
           
  0.843
AK4
Adenylate kinase 4, mitochondrial; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Efficiently phosphorylates AMP and dAMP using ATP as phosphate donor, but phosphorylates only AMP when using GTP as phosphate donor. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. AK3 subfamily (229 aa)
           
  0.841
ALG6
ALG6, alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family (291 aa)
           
  0.836
ANGPTL3
Angiopoietin-like 3 (454 aa)
           
  0.772
DNAJC6
DnaJ (Hsp40) homolog, subfamily C, member 6 (993 aa)
           
  0.765
ATG4C
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy (456 aa)
           
  0.760
TMCC3
Transmembrane and coiled-coil domain family 3 (480 aa)
           
  0.757
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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