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STRINGSTRING
DTX4 protein (Latimeria chalumnae) - STRING interaction network
"DTX4" - Deltex 4, E3 ubiquitin ligase in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DTX4Deltex 4, E3 ubiquitin ligase (599 aa)    
Predicted Functional Partners:
B4GALT2
Beta-1,4-galactosyltransferase 2; UDP-Gal-betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 (376 aa)
           
  0.785
MEGF11
Multiple EGF-like-domains 11 (963 aa)
     
   
  0.592
RITA1
RBPJ interacting and tubulin associated 1 (292 aa)
           
  0.592
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region a (487 aa)
     
 
  0.576
NOTCH1
Notch 1 (2494 aa)
     
 
  0.561
NOTCH4
Notch 4 (2519 aa)
     
 
  0.561
JAG2
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling (1106 aa)
     
 
  0.540
JAG1
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling (1220 aa)
     
 
  0.535
NOTCH2
Notch 2 (2489 aa)
     
 
  0.491
ENSLACG00000006119
Uncharacterized protein (43 aa)
           
  0.483
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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