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VPS26B protein (Latimeria chalumnae) - STRING interaction network
"VPS26B" - Vacuolar protein sorting 26 homolog B (S. pombe) in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS26BVacuolar protein sorting 26 homolog B (S. pombe) (194 aa)    
Predicted Functional Partners:
VPS35
Vacuolar protein sorting 35 homolog (S. cerevisiae) (790 aa)
     
  0.977
VPS29
Vacuolar protein sorting 29 homolog (S. cerevisiae); Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway (204 aa)
     
  0.977
SNX3
Sorting nexin 3 (108 aa)
     
  0.926
SNX10
Sorting nexin 10 (203 aa)
     
  0.926
SNX11
Sorting nexin 11 (216 aa)
     
  0.926
SNX12
Sorting nexin 12 (174 aa)
     
  0.926
SNX8
Sorting nexin 8 (571 aa)
     
  0.885
SNX1
Sorting nexin 1 (510 aa)
     
  0.885
SNX30
Sorting nexin family member 30 (513 aa)
     
  0.885
SNX7
Sorting nexin 7 (426 aa)
     
  0.885
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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