STRINGSTRING
FNTA protein (Latimeria chalumnae) - STRING interaction network
"FNTA" - Farnesyltransferase, CAAX box, alpha in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FNTAFarnesyltransferase, CAAX box, alpha (363 aa)    
Predicted Functional Partners:
FNTB
Protein farnesyltransferase subunit beta (413 aa)
     
  0.998
ZMPSTE24
Zinc metallopeptidase STE24 homolog (S. cerevisiae) (453 aa)
     
 
  0.951
GGPS1
Geranylgeranyl diphosphate synthase 1 (338 aa)
     
 
  0.941
PDSS1
Prenyl (decaprenyl) diphosphate synthase, subunit 1 (306 aa)
     
 
  0.933
RUSC1
RUN and SH3 domain containing 1 (800 aa)
     
 
  0.930
PDSS2
Prenyl (decaprenyl) diphosphate synthase, subunit 2 (384 aa)
     
 
  0.930
DHDDS
Dehydrodolichyl diphosphate synthase; Adds multiple copies of isopentenyl pyrophosphate (IPP) to farnesyl pyrophosphate (FPP) to produce dehydrodolichyl diphosphate (Dedol-PP), a precusrosor of dolichol which is utilized as a sugar carrier in protein glycosylation in the endoplasmic reticulum (ER) (335 aa)
     
 
  0.927
NUS1
Nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) (276 aa)
         
    0.900
FDFT1
Farnesyl-diphosphate farnesyltransferase 1 (416 aa)
     
 
  0.808
ENSLACG00000016997
Uncharacterized protein (446 aa)
     
  0.641
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
Server load: low (6%) [HD]