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DMXL1 protein (Latimeria chalumnae) - STRING interaction network
"DMXL1" - Dmx-like 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DMXL1Dmx-like 1 (3029 aa)    
Predicted Functional Partners:
ATP6V1A
ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A (617 aa)
     
 
  0.840
ATP6V1B2
ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 (512 aa)
     
 
  0.819
ATP6V1B1
ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1 (392 aa)
     
 
  0.819
ATP6V1C1
ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 (432 aa)
     
 
  0.755
ATP6V1C2
ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2 (391 aa)
     
 
  0.755
SKP1
S-phase kinase-associated protein 1 (172 aa)
       
 
  0.747
ATP6V1E1
ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 (212 aa)
       
 
  0.689
PIKFYVE
Phosphoinositide kinase, FYVE finger containing (2113 aa)
     
   
  0.591
RAB3GAP1
RAB3 GTPase activating protein subunit 1 (catalytic) (1006 aa)
     
 
  0.513
WDTC1
WD and tetratricopeptide repeats 1 (646 aa)
     
   
  0.504
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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