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ERCC6L protein (Latimeria chalumnae) - STRING interaction network
"ERCC6L" - Excision repair cross-complementing rodent repair deficiency, complementation group 6-like in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERCC6LExcision repair cross-complementing rodent repair deficiency, complementation group 6-like (1224 aa)    
Predicted Functional Partners:
TBPL2
TATA box binding protein like 2 (344 aa)
     
  0.937
TBP
TATA box binding protein (301 aa)
     
  0.937
TBPL1
TBP-like 1 (124 aa)
     
  0.907
PLK1
Polo-like kinase 1 (595 aa)
     
  0.892
ENSLACG00000015863
Uncharacterized protein (179 aa)
     
 
  0.776
DR1
Down-regulator of transcription 1, TBP-binding (negative cofactor 2) (176 aa)
     
 
  0.776
RMI1
RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) (616 aa)
     
 
  0.774
XPA
Xeroderma pigmentosum, complementation group A (274 aa)
       
  0.758
ERCC5
Excision repair cross-complementing rodent repair deficiency, complementation group 5 (1193 aa)
     
  0.744
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 (1017 aa)
   
0.728
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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