STRINGSTRING
TBC1D10A protein (Latimeria chalumnae) - STRING interaction network
"TBC1D10A" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D10AUncharacterized protein; TBC1 domain family, member 10A (345 aa)    
Predicted Functional Partners:
RAB35
RAB35, member RAS oncogene family (203 aa)
     
 
  0.812
RAB22A
RAB22A, member RAS oncogene family (194 aa)
     
 
  0.678
TBC1D22B
TBC1 domain family, member 22B (506 aa)
     
 
  0.665
SGSM2
Small G protein signaling modulator 2 (900 aa)
           
  0.592
NSF
N-ethylmaleimide sensitive factor, vesicle fusing ATPase; N-ethylmaleimide-sensitive factor (744 aa)
       
 
  0.577
SRRM2
Uncharacterized protein; Serine/arginine repetitive matrix 2 (909 aa)
     
   
  0.535
CDC16
Cell division cycle 16 (545 aa)
     
   
  0.525
TRAPPC10
annotation not available (1258 aa)
     
 
  0.517
TBC1D30
TBC1 domain family, member 30 (742 aa)
           
  0.511
ANKRD27
Ankyrin repeat domain 27 (VPS9 domain) (888 aa)
     
 
  0.503
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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