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RRP7A protein (Latimeria chalumnae) - STRING interaction network
"RRP7A" - Ribosomal RNA processing 7 homolog A (S. cerevisiae) in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RRP7ARibosomal RNA processing 7 homolog A (S. cerevisiae) (273 aa)    
Predicted Functional Partners:
NOL6
Nucleolar protein family 6 (RNA-associated) (826 aa)
     
  0.985
NOC4L
Nucleolar complex associated 4 homolog (S. cerevisiae) (521 aa)
     
    0.952
WDR46
WD repeat domain 46 (614 aa)
     
  0.935
CIRH1A
Cirrhosis, autosomal recessive 1A (cirhin) (697 aa)
     
  0.935
KRR1
KRR1, small subunit (SSU) processome component, homolog (yeast); Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (379 aa)
     
 
  0.914
IMP3
IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast) (183 aa)
     
 
  0.868
NOP14
NOP14 nucleolar protein homolog (yeast) (872 aa)
     
  0.864
TBL3
Transducin (beta)-like 3 (803 aa)
     
  0.852
WDR3
WD repeat domain 3 (944 aa)
     
  0.839
DDX52
DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 (615 aa)
     
 
  0.837
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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