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TAF5 protein (Latimeria chalumnae) - STRING interaction network
TAF5 RNA polymerase II, TATA box binding protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF5TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa (622 aa)    
Predicted Functional Partners:
TAF6
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa (675 aa)
     
 
  0.986
TAF12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa (217 aa)
     
 
  0.981
TAF2
TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa (1039 aa)
     
 
  0.978
TAF7
TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor (366 aa)
     
 
  0.978
TAF11
TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa (209 aa)
     
 
  0.978
TAF8
TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa (315 aa)
     
 
  0.977
TAF4
TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa (830 aa)
     
 
  0.966
TBP
TATA box binding protein (301 aa)
     
 
  0.962
ENSLACG00000011936
TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor (1561 aa)
     
 
  0.955
TAF10
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors (142 aa)
     
 
  0.951
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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