STRINGSTRING
TSPAN4 protein (Latimeria chalumnae) - STRING interaction network
"TSPAN4" - Tetraspanin 4 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN4Tetraspanin 4 (266 aa)    
Predicted Functional Partners:
LHFPL5
Lipoma HMGIC fusion partner-like 5 (222 aa)
         
  0.606
DST
Dystonin (6179 aa)
     
  0.591
TM4SF4
Transmembrane 4 L six family member 4 (133 aa)
           
  0.556
PLS1
Plastin 1 (621 aa)
     
  0.458
SLC18B1
Solute carrier family 18, subfamily B, member 1 (412 aa)
           
  0.439
ELF5
E74-like factor 5 (ets domain transcription factor) (259 aa)
           
  0.430
APBA1
Amyloid beta (A4) precursor protein-binding, family A, member 1 (812 aa)
           
  0.428
USH1C
Usher syndrome 1C (autosomal recessive, severe) (830 aa)
         
  0.420
CD9
CD9 molecule (149 aa)
       
 
  0.401
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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