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STRINGSTRING
TSPAN4 protein (Latimeria chalumnae) - STRING interaction network
"TSPAN4" - Tetraspanin 4 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN4Tetraspanin 4 (266 aa)    
Predicted Functional Partners:
PLP1
Proteolipid protein 1 (245 aa)
       
 
  0.781
POLL
Polymerase (DNA directed), lambda (572 aa)
           
  0.771
ASPDH
Aspartate dehydrogenase domain containing (285 aa)
           
  0.771
TM4SF4
Uncharacterized protein; Transmembrane 4 L six family member 4 (133 aa)
           
  0.670
TSG101
Tumor susceptibility 101 (392 aa)
           
  0.633
PMP22
Peripheral myelin protein 22 (159 aa)
     
 
  0.629
PTGFRN
Prostaglandin F2 receptor inhibitor (880 aa)
     
 
  0.621
ENSLACG00000000980
annotation not available (137 aa)
       
 
  0.596
ENSLACG00000009401
Integrin beta 3b (769 aa)
     
 
  0.573
MAEA
Uncharacterized protein; Macrophage erythroblast attacher (105 aa)
           
  0.571
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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