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SLC47A1 protein (Latimeria chalumnae) - STRING interaction network
"SLC47A1" - Multidrug and toxin extrusion protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC47A1Multidrug and toxin extrusion protein; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family (575 aa)    
Predicted Functional Partners:
SLC2A9
Solute carrier family 2 (facilitated glucose transporter), member 9; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family (526 aa)
   
   
  0.805
LRRC46
Uncharacterized protein; Leucine rich repeat containing 46 (441 aa)
       
 
  0.785
QSOX2
Quiescin Q6 sulfhydryl oxidase 2 (644 aa)
           
  0.785
PRRC2B
Proline-rich coiled-coil 2B (2219 aa)
           
  0.618
RNMTL1
Mitochondrial rRNA methyltransferase 3; RNA methyltransferase like 1a (458 aa)
   
   
  0.594
SLC29A3
Solute carrier family 29 (equilibrative nucleoside transporter), member 3 (384 aa)
     
   
  0.581
SLC38A1
Solute carrier family 38, member 1 (410 aa)
       
 
  0.576
SLC6A19
Transporter; Solute carrier family 6 (neurotransmitter transporter), member 19a; Belongs to the sodium-neurotransmitter symporter (SNF) (TC 2.A.22) family (635 aa)
           
  0.575
ENSLACG00000006356
Solute carrier family 22 (organic cation transporter), member 2 (562 aa)
     
   
  0.574
SLC22A16
Solute carrier family 22 (organic cation/carnitine transporter), member 16 (410 aa)
     
   
  0.567
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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