STRINGSTRING
EOMES protein (Latimeria chalumnae) - STRING interaction network
"EOMES" - Eomesodermin in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOMESEomesodermin (419 aa)    
Predicted Functional Partners:
EMX1
Empty spiracles homeobox 1 (233 aa)
     
 
  0.694
PAX6
Paired box 6 (463 aa)
     
 
  0.682
DLX2
Distal-less homeobox 2 (278 aa)
     
 
  0.563
NKX2-1
NK2 homeobox 1 (348 aa)
       
 
  0.553
ENSLACG00000009870
NK2 homeobox 4 (343 aa)
       
 
  0.553
PAX7
Paired box 7 (420 aa)
     
 
  0.464
PAX3
Paired box 3 (488 aa)
     
 
  0.464
FOXA2
Forkhead box A2 (429 aa)
     
 
  0.462
RELN
Reelin (3462 aa)
           
  0.446
LEF1
Lymphoid enhancer-binding factor 1 (397 aa)
     
  0.440
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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