STRINGSTRING
VAC14 protein (Latimeria chalumnae) - STRING interaction network
"VAC14" - Vac14 homolog (S. cerevisiae) in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAC14Vac14 homolog (S. cerevisiae) (777 aa)    
Predicted Functional Partners:
PIKFYVE
Phosphoinositide kinase, FYVE finger containing (2113 aa)
     
  0.968
FIG4
FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae) (903 aa)
     
  0.965
SYNJ2
Synaptojanin 2 (1075 aa)
     
  0.780
SYNJ1
Synaptojanin 1 (1563 aa)
     
  0.780
SACM1L
SAC1 suppressor of actin mutations 1-like (yeast) (361 aa)
     
  0.666
PIP5K1C
Phosphatidylinositol-4-phosphate 5-kinase, type I, gamma (646 aa)
     
  0.658
PIP5K1A
Phosphatidylinositol-4-phosphate 5-kinase, type I, alpha (878 aa)
     
  0.658
PIP5K1B
Phosphatidylinositol-4-phosphate 5-kinase, type I, beta (501 aa)
     
  0.604
INPP5F
Inositol polyphosphate-5-phosphatase F (874 aa)
     
  0.590
ENSLACG00000011318
Uncharacterized protein (359 aa)
     
  0.590
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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